|
---
|
|
dataset_info:
|
|
- config_name: BindingDB_filtered
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Drug_ID
|
|
dtype: string
|
|
- name: Drug
|
|
dtype: string
|
|
- name: Target_ID
|
|
dtype: string
|
|
- name: Target
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
splits:
|
|
- name: train
|
|
num_examples: 24700
|
|
- config_name: CATS
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Compound ID
|
|
dtype: string
|
|
- name: Drug
|
|
dtype: string
|
|
- name: IC50
|
|
dtype: float32
|
|
- name: Target
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
splits:
|
|
- name: train
|
|
num_examples: 136
|
|
- config_name: HIF2A
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
- name: Drug
|
|
dtype: string
|
|
- name: Target
|
|
dtype: string
|
|
splits:
|
|
- name: train
|
|
num_examples: 37
|
|
- config_name: HSP90
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Drug
|
|
dtype: string
|
|
- name: IC50 (nM)
|
|
dtype: float32
|
|
- name: Target
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
splits:
|
|
- name: train
|
|
num_examples: 192
|
|
- config_name: LeakyPDB
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: header
|
|
dtype: string
|
|
- name: smiles
|
|
dtype: string
|
|
- name: category
|
|
dtype: string
|
|
- name: seq
|
|
dtype: string
|
|
- name: resolution
|
|
dtype: float32
|
|
- name: date
|
|
dtype: string
|
|
- name: type
|
|
dtype: string
|
|
- name: new_split
|
|
dtype: string
|
|
- name: CL1
|
|
dtype: bool
|
|
- name: CL2
|
|
dtype: bool
|
|
- name: CL3
|
|
dtype: bool
|
|
- name: remove_for_balancing_val
|
|
dtype: bool
|
|
- name: kd/ki
|
|
dtype: string
|
|
- name: value
|
|
dtype: float32
|
|
- name: covalent
|
|
dtype: bool
|
|
splits:
|
|
- name: train
|
|
num_examples: 19443
|
|
- config_name: MCL1
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
- name: Drug
|
|
dtype: string
|
|
- name: Target
|
|
dtype: string
|
|
splits:
|
|
- name: train
|
|
num_examples: 25
|
|
- config_name: Mpro
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Drug
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
- name: Target
|
|
dtype: string
|
|
splits:
|
|
- name: train
|
|
num_examples: 2749
|
|
- config_name: SYK
|
|
features:
|
|
- name: Index
|
|
dtype: string
|
|
- name: Y
|
|
dtype: float32
|
|
- name: Drug
|
|
dtype: string
|
|
- name: Target
|
|
dtype: string
|
|
splits:
|
|
- name: train
|
|
num_examples: 44
|
|
configs:
|
|
- config_name: BindingDB_filtered
|
|
data_files:
|
|
- split: train
|
|
path: BindingDB_filtered/train/data-*
|
|
- config_name: CATS
|
|
data_files:
|
|
- split: train
|
|
path: CATS/train/data-*
|
|
- config_name: HIF2A
|
|
data_files:
|
|
- split: train
|
|
path: HIF2A/train/data-*
|
|
- config_name: HSP90
|
|
data_files:
|
|
- split: train
|
|
path: HSP90/train/data-*
|
|
- config_name: LeakyPDB
|
|
data_files:
|
|
- split: train
|
|
path: LeakyPDB/train/data-*
|
|
- config_name: MCL1
|
|
data_files:
|
|
- split: train
|
|
path: MCL1/train/data-*
|
|
- config_name: Mpro
|
|
data_files:
|
|
- split: train
|
|
path: Mpro/train/data-*
|
|
- config_name: SYK
|
|
data_files:
|
|
- split: train
|
|
path: SYK/train/data-*
|
|
license: cc-by-4.0
|
|
pretty_name: BALM-Benchmark
|
|
tags:
|
|
- chemistry
|
|
- biology
|
|
size_categories:
|
|
- 10K<n<100K
|
|
---
|
|
|
|
# Dataset Card for BALM-Benchmark
|
|
|
|
<!-- Provide a quick summary of the dataset. -->
|
|
|
|
## Dataset Details
|
|
|
|
### Dataset Description
|
|
|
|
## Citation
|
|
|
|
<!-- If there is a paper or blog post introducing the dataset, the APA and Bibtex information for that should go in this section. -->
|
|
|
|
**BibTeX:**
|
|
|
|
```
|
|
|
|
```
|
|
|
|
## Dataset Card Contact
|
|
|
|
- Rohan Gorantla ([email protected])
|
|
- Aryo Pradipta Gema ([email protected])
|
|
- Antonia Mey () |